THetA2
Supported Tool
Estimates tumour purity and clonal / subclonal copy number
The module plots the % germline and % tumour subclone for each sample.
Note that each sample can have multiple maximum likelihood solutions - the MultiQC
module plots proportions for the first one in the results file (*.BEST.results).
Also note that if there are more than 5 tumour subclones, their percentages are summed.
File search patterns
theta2:
fn: "*.BEST.results"